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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8531989_8532216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8531989 - 8532216

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTAC

5'SS Class:

major

3'SS Sequence:

CTGTCTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TACTTCTGACTC

Flanking Amino Acid:

WLLLTGISAQQNRVVGAMQL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

71.4

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

80.1

0.68

0.8

73.1

37.3

Minor 5ss

39.5

-1.2

52.7

44.5

Minor BPS

49.4

-0

1.7

59.54

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557