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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8533209_8533604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8533209 - 8533604

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

ATCTGATTAATC

Flanking Amino Acid:

AQNDFPVAMQISDKHDVVFL

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

75.7

29.3

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

82.1

0.72

0.8

76.2

32.4

Minor 5ss

43.3

-0.7

2.8

55.5

48.7

Minor BPS

52.3

0.05

65.6

40.4

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012724

8529318 - 8551874

22557

ENSAPLT00000022160

8529318 - 8551874

22557