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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8533779_8534251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8533779 - 8534251

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATCATTTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTTCCTCAATC

Flanking Amino Acid:

GIIGVNRKGQVLSVCVEEEN

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.4

35.9

Major BPS

76.3

0.65

67.3

39.3

Major PPT

76.2

0.59

73.9

40.1

Minor 5ss

34.5

-1.8

40.9

39.3

Minor BPS

79.3

0.9

1.4

86.86

30.3

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557