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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8535899_8536183_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8535899 - 8536183

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCACTCTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TACTTCTCACTC

Flanking Amino Acid:

VQKIVLYAKKVGYTPDWIFL

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

0.87

0.8

85.6

Major PPT

0.67

0.8

77.2

31.2

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

48.7

-0.1

1.8

58.88

40.7

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557