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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8536307_8536558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8536307 - 8536558

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAATAAT

5'SS Class:

major

3'SS Sequence:

ATCTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTTCAATTACAA

Flanking Amino Acid:

DEEPLADITQIVDVFMEYNL

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

83.1

28.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

88.9

0.87

0.7

84.4

29.7

Minor 5ss

38.5

-1.3

39.8

Minor BPS

-0.3

2.1

64.85

40.6

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557