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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8537214_8537330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8537214 - 8537330

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAAAAT

5'SS Class:

major

3'SS Sequence:

TGTATTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TGGGTCTAAAAT

Flanking Amino Acid:

VVHTHLLNPEWLVNYFGSLS

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

75.8

33.1

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

85.9

0.81

0.8

80.7

36.7

Minor 5ss

40.6

-1.1

57.1

47.2

Minor BPS

48.4

-0

1.9

65.07

45.4

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012724

8529318 - 8551874

22557

ENSAPLT00000022160

8529318 - 8551874

22557