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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8539731_8540317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8539731 - 8540317

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGATCTCGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ATTTCTTAAAAT

Flanking Amino Acid:

QKYIEIYVQKVNPSRLPVVI

Intron Amino Acid Position:

801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

68.4

0.41

66.5

40.4

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

65.5

0.57

1.7

83.47

37.5

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557