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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8541090_8541436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8541090 - 8541436

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTATG

5'SS Class:

major

3'SS Sequence:

GCTTTTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TGCTTTTTCACT

Flanking Amino Acid:

RGQCDLELINVCNENSLFKS

Intron Amino Acid Position:

927

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

72.6

0.51

0.9

39.3

Minor 5ss

47.9

-0.2

2.5

64.1

40.5

Minor BPS

59.4

0.38

1.7

75.46

41.9

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557