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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8541560_8541655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8541560 - 8541655

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGCTG

5'SS Class:

major

3'SS Sequence:

ACTCTGCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCAAT

U12 Branch Point Sequence:

CTTACCTGACGT

Flanking Amino Acid:

NPYRRPLIDQVVQTALSETQ

Intron Amino Acid Position:

968

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

59.4

Major BPS

61.7

0.29

1.4

70.7

42.6

Major PPT

73.4

0.53

0.9

65.3

35.7

Minor 5ss

39.8

-1.1

3.4

55.3

48.9

Minor BPS

47.7

-0.1

2.1

69.31

47.1

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557