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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8542153_8542392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8542153 - 8542392

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTAA

5'SS Class:

major

3'SS Sequence:

ACCCTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

AGTGACTGATCA

Flanking Amino Acid:

KFDVNTSAVQVLIEHIGNLD

Intron Amino Acid Position:

1078

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.9

34.5

Major BPS

0.57

1.2

41.2

Major PPT

74.4

0.55

0.8

69.3

30.6

Minor 5ss

54.1

0.14

2.1

66.7

44.7

Minor BPS

45.2

-0.3

1.9

56.77

41.9

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557