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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8542586_8543031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8542586 - 8543031

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGATTA

5'SS Class:

major

3'SS Sequence:

CCCCATTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GCATTCTGAACC

Flanking Amino Acid:

MEVVQAANASGNWEELVKYL

Intron Amino Acid Position:

1142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

72.2

33.2

Major BPS

82.1

0.8

71.6

36.4

Major PPT

73.1

0.52

0.8

66.6

32.6

Minor 5ss

47.8

-0.2

2.8

61.4

45.4

Minor BPS

61.3

0.33

1.5

64.68

40.5

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557