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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8543190_8543402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8543190 - 8543402

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

GCTGCAAGAATA

Flanking Amino Acid:

NGPNNAHIQQVGDRCYDEKM

Intron Amino Acid Position:

1195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

26.9

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

75.2

0.57

0.9

70.1

36.5

Minor 5ss

30.6

-2.2

3.3

40.3

40.1

Minor BPS

-0.6

1.9

51.19

40.2

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557