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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8543568_8543659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8543568 - 8543659

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TATACTAAAATT

Flanking Amino Acid:

KANSTRTWKEVCFACVDGKE

Intron Amino Acid Position:

1250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

0.75

78.6

Major PPT

76.7

0.6

0.9

67.4

42.7

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

48.6

-0

1.9

70.67

40.5

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557