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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8543768_8543893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8543768 - 8543893

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CATCTCTTAACT

Flanking Amino Acid:

ELEELINYYQDRGYFEELIT

Intron Amino Acid Position:

1286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.1

77.9

38.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

0.65

0.8

77.1

36.8

Minor 5ss

40.6

-1

2.6

50.6

45.9

Minor BPS

74.6

0.85

1.2

82.35

38.7

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557