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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8544062_8544219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8544062 - 8544219

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAAGAC

5'SS Class:

major

3'SS Sequence:

GCCTTTTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATATAATAATT

Flanking Amino Acid:

LFWSRVNIPKVLRAAEQAHL

Intron Amino Acid Position:

1342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

0.9

30.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.9

0.42

0.9

68.4

37.4

Minor 5ss

24.6

-2.9

3.2

31.7

42.9

Minor BPS

49.3

0.03

1.9

72.09

38.4

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557