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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8544772_8544934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8544772 - 8544934

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

GTTGCCTTGACT

Flanking Amino Acid:

HTRAVTFFTKVKQLPLVKPY

Intron Amino Acid Position:

1436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

77.7

31.1

Major BPS

72.5

0.56

1.1

63.4

Major PPT

71.4

0.48

71.7

33.2

Minor 5ss

41.5

-0.9

2.7

54.2

42.9

Minor BPS

77.6

0.95

1.3

88.2

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557