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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8545900_8546208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8545900 - 8546208

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

CTAACCAGACTC

Flanking Amino Acid:

ELCKKDRLYKDAMQYASESK

Intron Amino Acid Position:

1530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

77.4

0.62

0.8

72.7

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

41.7

-0.6

1.9

49.86

40.4

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557