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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8546431_8547531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8546431 - 8547531

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

AATTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTTTCTAAGCT

Flanking Amino Acid:

IQVMKEYLTKVDAIKEKVDK

Intron Amino Acid Position:

1604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

80.6

0.69

0.9

35.6

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

64.9

0.55

1.9

87.32

38.6

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557