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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8548009_8662050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8548009 - 8662050

Intron Length:

114042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACAC

5'SS Class:

major

3'SS Sequence:

TGTCTACTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CTCTTCTGAAGC

Flanking Amino Acid:

FQKPILLICQHTLVTVKRSE

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

67.9

37.3

Major BPS

82.1

0.8

71.6

36.4

Major PPT

71.7

0.49

70.3

40.3

Minor 5ss

32.3

-2

3.1

42.2

44.6

Minor BPS

52.1

0.05

1.8

62.1

43.7

Associated Gene:

Gene:

RNFT1

Ensembl Gene ID:

ENSAPLG00000010687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011142

8547868 - 8667868

120001