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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8599261_8602928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8599261 - 8602928

Intron Length:

3668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

TTGCACTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAG

U12 Branch Point Sequence:

TTGCACTTTACA

Flanking Amino Acid:

GFFGILACASIPNPLFDLAG

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

71.7

34.4

Major BPS

59.4

0.23

1.5

69.4

37.7

Major PPT

79.3

0.66

0.9

72.5

37.4

Minor 5ss

42.7

-0.8

2.7

56.3

41.9

Minor BPS

56.3

0.19

1.9

70.22

41.4

Associated Gene:

Gene:

VMP1

Ensembl Gene ID:

ENSAPLG00000011498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011998

8560824 - 8619242

58419