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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8631285_8632258_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8631285 - 8632258

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGACCTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TGTCTTACAACT

Flanking Amino Acid:

VRKAWNMFASKAYVHQYTKY

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

82.2

0.8

0.9

81.6

Major PPT

68.5

0.42

0.9

61.4

34.8

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

48.8

-0

1.8

71.31

39.3

Associated Gene:

Gene:

TUBD1

Ensembl Gene ID:

ENSAPLG00000011163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011634

8631119 - 8637943

6825