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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8635024_8635658_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8635024 - 8635658

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAATGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

HVIWPYGTGEVIVQNYNSVL

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

78.1

29.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

85.9

0.81

0.8

84.9

29.9

Minor 5ss

31.2

-2.2

3.3

42.9

44.7

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

TUBD1

Ensembl Gene ID:

ENSAPLG00000011163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011634

8631119 - 8637943

6825