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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8652086_8653654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8652086 - 8653654

Intron Length:

1569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

AAACCCTTAATC

Flanking Amino Acid:

KVEPPFKPLLQSEEDVSQFD

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.9

34.5

Major BPS

80.4

0.76

80.3

31.8

Major PPT

68.1

0.41

1.1

70.4

39.2

Minor 5ss

44.6

-0.6

2.5

57.8

40.7

Minor BPS

69.8

0.6

1.2

68.98

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011252

8642942 - 8656313

13372