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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8665722_8666365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8665722 - 8666365

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GATACTTTATTT

Flanking Amino Acid:

YTFHSQSLYYSLIFLNPTVD

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.8

22.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

-1.6

2.6

43.5

43.6

Minor BPS

56.6

0.28

1.6

70.63

40.5

Associated Gene:

Gene:

RNFT1

Ensembl Gene ID:

ENSAPLG00000010687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011142

8547868 - 8667868

120001