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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8705197_8707117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8705197 - 8707117

Intron Length:

1921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TTCTTTCCCACA

Flanking Amino Acid:

EDCHSNLFCLADLTGIKWKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

63.7

0.34

1.2

41.8

Major PPT

84.6

0.78

0.7

80.2

25.4

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

-0.5

2.1

59.19

41.2

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170