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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8707353_8716607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8707353 - 8716607

Intron Length:

9255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TCAATGTTAACT

Flanking Amino Acid:

FADLIHHDLSEEEDGVWENG

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

74.2

0.6

0.9

75.7

Major PPT

81.1

0.7

0.8

76.8

31.9

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

54.2

0.21

2.1

72.89

43.9

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170