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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8716777_8730561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8716777 - 8730561

Intron Length:

13785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

AGATCTCTACAT

Flanking Amino Acid:

YEKDEKPINKSEHLSCSFTF

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

70.2

0.5

1.1

77.2

Major PPT

77.6

0.62

0.8

69.4

36.9

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

45.3

-0.2

1.9

62.23

41.2

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170