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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8730708_8731796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8730708 - 8731796

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TAATCTCTAATT

Flanking Amino Acid:

LAQQSNSPFQVILSPFGLNG

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

0.72

78.4

31.2

Major PPT

89.4

0.89

0.7

89.2

27.3

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

64.1

0.52

1.6

78.87

37.1

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062