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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8731995_8732884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8731995 - 8732884

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

ACAACTGTAAAA

Flanking Amino Acid:

DSLAAVEVLVAGVRMVYPAC

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

79.7

33.4

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

89.9

0.9

0.7

88.2

29.1

Minor 5ss

44.9

-0.6

3.2

63.2

43.8

Minor BPS

44.8

-0.3

52.4

39.4

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170