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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8734281_8734567_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8734281 - 8734567

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACGTATT

5'SS Class:

strong_major

3'SS Sequence:

TACTGAATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGATCCCAAATA

Flanking Amino Acid:

QECNMNRAQNKRKYSATSNG

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

84.8

32.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

66.3

0.37

58.3

40.7

Minor 5ss

42.3

-0.8

3.1

59.9

38.7

Minor BPS

50.7

0.02

65.87

40.4

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170