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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8742212_8742549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8742212 - 8742549

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTTTTCTTTATA

Flanking Amino Acid:

MSLFSPSVKQDAQRIAAHAR

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

91.9

0.94

0.6

88.3

21.5

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

72.4

0.7

1.5

82.54

31.8

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170