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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8743897_8744037_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8743897 - 8744037

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

AATCTGAAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTAATCTGAAAT

Flanking Amino Acid:

AGNLDPLSCISTADLHKMYP

Intron Amino Acid Position:

843

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

81.6

33.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

52.5

0.06

50.2

42.1

Minor 5ss

55.3

0.18

2.7

73.8

36.4

Minor BPS

51.5

0.13

1.6

67.71

42.4

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170