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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8744253_8744689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8744253 - 8744689

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GTATAACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GATGCTTTACCA

Flanking Amino Acid:

FCSPKPAEIKDYSYVYKPEN

Intron Amino Acid Position:

915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.8

38.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

66.3

0.37

56.1

44.3

Minor 5ss

36.1

-1.6

3.1

51.1

45.4

Minor BPS

55.8

0.18

1.7

64.86

41.7

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170