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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8746920_8748326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8746920 - 8748326

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CAGGCCTTAACA

Flanking Amino Acid:

TCLHHWSKRNVLDVSMQCSQ

Intron Amino Acid Position:

1286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

79.5

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.1

0.86

0.7

85.5

Minor 5ss

37.9

-1.4

2.9

49.2

Minor BPS

0.56

1.5

68.17

44.2

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170