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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8750472_8750687_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8750472 - 8750687

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

CAGTACTAAATG

Flanking Amino Acid:

LYAQVCRYELGPYLASQPLD

Intron Amino Acid Position:

1480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.2

33.4

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

0.65

0.9

77.1

37.1

Minor 5ss

44.3

-0.6

3.2

65.5

45.8

Minor BPS

47.1

-0.3

1.9

48.99

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170