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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8752064_8752706_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8752064 - 8752706

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

GTAACTTTATTT

Flanking Amino Acid:

PNIKNIISVQIVPCQYLLQP

Intron Amino Acid Position:

1709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

70.2

37.7

Major BPS

75.1

0.62

65.6

Major PPT

81.6

0.71

0.9

77.5

36.5

Minor 5ss

31.7

-2.1

37.9

46.9

Minor BPS

55.8

0.26

1.6

70.28

40.9

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010569

8705131 - 8757300

52170

ENSAPLT00000033151

8705131 - 8758192

53062