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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8752899_8753049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8752899 - 8753049

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TCATCTTTTATA

Flanking Amino Acid:

AMETALKSPDRPECIRLYTP

Intron Amino Acid Position:

1773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

83.4

Major BPS

0.65

1.1

77.4

37.3

Major PPT

80.8

0.69

0.8

76.2

32.2

Minor 5ss

35.6

-1.6

3.5

53.7

43.8

Minor BPS

60.6

0.33

1.6

67.35

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170