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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8753274_8753704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8753274 - 8753704

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

TCIINIDVPNRARRKKGSAR

Intron Amino Acid Position:

1847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.6

0.6

0.9

68.1

42.1

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170