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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8754825_8755052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8754825 - 8755052

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAATATTAAACT

Flanking Amino Acid:

HYPHGGDMGKGQGTDRLLST

Intron Amino Acid Position:

2060

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

78.2

0.64

0.9

72.9

37.4

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

56.6

0.29

1.8

75.03

41.4

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033151

8705131 - 8758192

53062

ENSAPLT00000010569

8705131 - 8757300

52170