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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8756500_8757167_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8756500 - 8757167

Intron Length:

668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATG

5'SS Class:

major

3'SS Sequence:

TTTTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

GTTGGCTTAATG

Flanking Amino Acid:

LDSNQTSDVLRFVLEQYNAL

Intron Amino Acid Position:

2151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

76.3

38.9

Major BPS

69.2

0.48

1.3

71.9

Major PPT

90.8

0.92

0.7

88.7

28.3

Minor 5ss

45.5

-0.5

2.5

59.8

44.7

Minor BPS

56.7

0.07

63.65

44.7

Associated Gene:

Gene:

MED13

Ensembl Gene ID:

ENSAPLG00000010093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010569

8705131 - 8757300

52170

ENSAPLT00000033151

8705131 - 8758192

53062