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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8763025_8763306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8763025 - 8763306

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTATCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AACTCTGTAACT

Flanking Amino Acid:

AADVLCILQAELPSLLPIVD

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.9

0.79

0.9

78.2

39.8

Minor 5ss

44.8

-0.6

2.7

59.5

45.1

Minor BPS

58.5

0.34

75.1

41.9

Associated Gene:

Gene:

INTS2

Ensembl Gene ID:

ENSAPLG00000009449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009987

8761468 - 8776549

15082