Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_8766189_8766282_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8766189 - 8766282

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTATCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TGGGAATTAACT

Flanking Amino Acid:

WMIKEEAYFESISGVSASFG

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

71.6

0.49

0.9

65.9

39.7

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

51.6

0.13

1.9

71.1

45.1

Associated Gene:

Gene:

INTS2

Ensembl Gene ID:

ENSAPLG00000009449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009987

8761468 - 8776549

15082