Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_8768751_8769594_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8768751 - 8769594

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATATGTG

5'SS Class:

major

3'SS Sequence:

CATTCCCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTTTCCCATTC

Flanking Amino Acid:

EALLANTKTLAAMQRKPKSY

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

71.2

38.9

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

76.2

0.59

0.8

70.2

30.3

Minor 5ss

41.7

-0.9

3.2

57.3

47.4

Minor BPS

47.3

-0.2

66.86

39.1

Associated Gene:

Gene:

INTS2

Ensembl Gene ID:

ENSAPLG00000009449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009987

8761468 - 8776549

15082