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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8781565_8782487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8781565 - 8782487

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTCCAACA

Flanking Amino Acid:

RIRPLETEQQVRKRHCIAKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.8

78.3

29.1

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

0.4

1.9

80.53

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193