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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8782623_8788882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8782623 - 8788882

Intron Length:

6260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTTTGGGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATTTTGTTAATC

Flanking Amino Acid:

VKNLTFSPKPSVSSCTECSC

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

84.4

0.85

34.5

Major PPT

79.3

0.66

72.2

42.7

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

63.3

0.4

75.93

34.7

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193