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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8789177_8789811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8789177 - 8789811

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CATGTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

CTGTGCTCATGT

Flanking Amino Acid:

LCVELLEGKHGKSCPYYHAV

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

85.1

25.6

Major BPS

79.7

0.74

79.6

35.6

Major PPT

74.3

0.55

69.5

41.3

Minor 5ss

34.4

-1.8

2.9

46.9

41.8

Minor BPS

41.4

-0.5

2.3

59.35

49.7

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193