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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8790787_8794646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8790787 - 8794646

Intron Length:

3860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

CTCTCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTATGCTAAAAT

Flanking Amino Acid:

HLRAVCYSLTNWLKESSSQL

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

68.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.86

0.7

83.5

24.7

Minor 5ss

31.8

-2.1

3.3

38.6

40.8

Minor BPS

53.6

0.19

2.2

78.07

43.9

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009509

8780652 - 8838844

58193

ENSAPLT00000028059

8780652 - 8837327

56676