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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8795434_8796044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8795434 - 8796044

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAGTTAATA

Flanking Amino Acid:

VLFCLFKDNSRYADDYKVAL

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.4

0.62

0.9

73.2

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

62.2

0.38

2.2

80.21

35.9

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193