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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8796217_8796324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8796217 - 8796324

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCTGG

5'SS Class:

major

3'SS Sequence:

CTCTCTAACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

ATTCTCTGAATT

Flanking Amino Acid:

LNFWCLNPAVAFSDLNDVRT

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

62.4

44.7

Major BPS

72.3

0.55

73.3

28.9

Major PPT

67.5

0.39

0.9

66.6

33.2

Minor 5ss

43.4

-0.7

2.9

52.7

46.4

Minor BPS

66.3

0.59

1.4

80.65

34.6

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193