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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8796463_8796853_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8796463 - 8796853

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTCT

5'SS Class:

strong_major

3'SS Sequence:

TGAAATACACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ACTTCTTAAATT

Flanking Amino Acid:

EANHVIRNSQVWVGTIGAGP

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

74.7

36.3

Major BPS

81.9

0.79

0.8

81.9

Major PPT

47.6

-0.1

1.2

40.3

42.4

Minor 5ss

45.8

-0.4

65.7

45.4

Minor BPS

64.6

0.54

1.6

77.48

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193